| { |
| "_name_or_path": "/data/users/mrdupont/emtrl/models/pretrained_cluster/mlm-bert-30", |
| "architectures": [ |
| "BertForRegression" |
| ], |
| "attention_probs_dropout_prob": 0.1, |
| "classifier_dropout": null, |
| "hidden_act": "gelu", |
| "hidden_dropout_prob": 0.1, |
| "hidden_size": 768, |
| "id2label": { |
| "0": "MaxAbsEStateIndex", |
| "1": "MaxEStateIndex", |
| "2": "MinAbsEStateIndex", |
| "3": "MinEStateIndex", |
| "4": "qed", |
| "5": "SPS", |
| "6": "MolWt", |
| "7": "HeavyAtomMolWt", |
| "8": "ExactMolWt", |
| "9": "NumValenceElectrons", |
| "10": "NumRadicalElectrons", |
| "11": "MaxPartialCharge", |
| "12": "MinPartialCharge", |
| "13": "MaxAbsPartialCharge", |
| "14": "MinAbsPartialCharge", |
| "15": "FpDensityMorgan1", |
| "16": "FpDensityMorgan2", |
| "17": "FpDensityMorgan3", |
| "18": "BCUT2D_MWHI", |
| "19": "BCUT2D_MWLOW", |
| "20": "BCUT2D_CHGHI", |
| "21": "BCUT2D_CHGLO", |
| "22": "BCUT2D_LOGPHI", |
| "23": "BCUT2D_LOGPLOW", |
| "24": "BCUT2D_MRHI", |
| "25": "BCUT2D_MRLOW", |
| "26": "AvgIpc", |
| "27": "BalabanJ", |
| "28": "BertzCT", |
| "29": "Chi0", |
| "30": "Chi0n", |
| "31": "Chi0v", |
| "32": "Chi1", |
| "33": "Chi1n", |
| "34": "Chi1v", |
| "35": "Chi2n", |
| "36": "Chi2v", |
| "37": "Chi3n", |
| "38": "Chi3v", |
| "39": "Chi4n", |
| "40": "Chi4v", |
| "41": "HallKierAlpha", |
| "42": "Kappa1", |
| "43": "Kappa2", |
| "44": "Kappa3", |
| "45": "LabuteASA", |
| "46": "PEOE_VSA1", |
| "47": "PEOE_VSA10", |
| "48": "PEOE_VSA11", |
| "49": "PEOE_VSA12", |
| "50": "PEOE_VSA13", |
| "51": "PEOE_VSA14", |
| "52": "PEOE_VSA2", |
| "53": "PEOE_VSA3", |
| "54": "PEOE_VSA4", |
| "55": "PEOE_VSA5", |
| "56": "PEOE_VSA6", |
| "57": "PEOE_VSA7", |
| "58": "PEOE_VSA8", |
| "59": "PEOE_VSA9", |
| "60": "SMR_VSA1", |
| "61": "SMR_VSA10", |
| "62": "SMR_VSA2", |
| "63": "SMR_VSA3", |
| "64": "SMR_VSA4", |
| "65": "SMR_VSA5", |
| "66": "SMR_VSA6", |
| "67": "SMR_VSA7", |
| "68": "SMR_VSA8", |
| "69": "SMR_VSA9", |
| "70": "SlogP_VSA1", |
| "71": "SlogP_VSA10", |
| "72": "SlogP_VSA11", |
| "73": "SlogP_VSA12", |
| "74": "SlogP_VSA2", |
| "75": "SlogP_VSA3", |
| "76": "SlogP_VSA4", |
| "77": "SlogP_VSA5", |
| "78": "SlogP_VSA6", |
| "79": "SlogP_VSA7", |
| "80": "SlogP_VSA8", |
| "81": "SlogP_VSA9", |
| "82": "TPSA", |
| "83": "EState_VSA1", |
| "84": "EState_VSA10", |
| "85": "EState_VSA11", |
| "86": "EState_VSA2", |
| "87": "EState_VSA3", |
| "88": "EState_VSA4", |
| "89": "EState_VSA5", |
| "90": "EState_VSA6", |
| "91": "EState_VSA7", |
| "92": "EState_VSA8", |
| "93": "EState_VSA9", |
| "94": "VSA_EState1", |
| "95": "VSA_EState10", |
| "96": "VSA_EState2", |
| "97": "VSA_EState3", |
| "98": "VSA_EState4", |
| "99": "VSA_EState5", |
| "100": "VSA_EState6", |
| "101": "VSA_EState7", |
| "102": "VSA_EState8", |
| "103": "VSA_EState9", |
| "104": "FractionCSP3", |
| "105": "HeavyAtomCount", |
| "106": "NHOHCount", |
| "107": "NOCount", |
| "108": "NumAliphaticCarbocycles", |
| "109": "NumAliphaticHeterocycles", |
| "110": "NumAliphaticRings", |
| "111": "NumAromaticCarbocycles", |
| "112": "NumAromaticHeterocycles", |
| "113": "NumAromaticRings", |
| "114": "NumHAcceptors", |
| "115": "NumHDonors", |
| "116": "NumHeteroatoms", |
| "117": "NumRotatableBonds", |
| "118": "NumSaturatedCarbocycles", |
| "119": "NumSaturatedHeterocycles", |
| "120": "NumSaturatedRings", |
| "121": "RingCount", |
| "122": "MolLogP", |
| "123": "MolMR", |
| "124": "fr_Al_COO", |
| "125": "fr_Al_OH", |
| "126": "fr_Al_OH_noTert", |
| "127": "fr_ArN", |
| "128": "fr_Ar_COO", |
| "129": "fr_Ar_N", |
| "130": "fr_Ar_NH", |
| "131": "fr_Ar_OH", |
| "132": "fr_COO", |
| "133": "fr_COO2", |
| "134": "fr_C_O", |
| "135": "fr_C_O_noCOO", |
| "136": "fr_C_S", |
| "137": "fr_HOCCN", |
| "138": "fr_Imine", |
| "139": "fr_NH0", |
| "140": "fr_NH1", |
| "141": "fr_NH2", |
| "142": "fr_N_O", |
| "143": "fr_Ndealkylation1", |
| "144": "fr_Ndealkylation2", |
| "145": "fr_Nhpyrrole", |
| "146": "fr_SH", |
| "147": "fr_aldehyde", |
| "148": "fr_alkyl_carbamate", |
| "149": "fr_alkyl_halide", |
| "150": "fr_allylic_oxid", |
| "151": "fr_amide", |
| "152": "fr_amidine", |
| "153": "fr_aniline", |
| "154": "fr_aryl_methyl", |
| "155": "fr_azide", |
| "156": "fr_azo", |
| "157": "fr_barbitur", |
| "158": "fr_benzene", |
| "159": "fr_benzodiazepine", |
| "160": "fr_bicyclic", |
| "161": "fr_diazo", |
| "162": "fr_dihydropyridine", |
| "163": "fr_epoxide", |
| "164": "fr_ester", |
| "165": "fr_ether", |
| "166": "fr_furan", |
| "167": "fr_guanido", |
| "168": "fr_halogen", |
| "169": "fr_hdrzine", |
| "170": "fr_hdrzone", |
| "171": "fr_imidazole", |
| "172": "fr_imide", |
| "173": "fr_isocyan", |
| "174": "fr_isothiocyan", |
| "175": "fr_ketone", |
| "176": "fr_ketone_Topliss", |
| "177": "fr_lactam", |
| "178": "fr_lactone", |
| "179": "fr_methoxy", |
| "180": "fr_morpholine", |
| "181": "fr_nitrile", |
| "182": "fr_nitro", |
| "183": "fr_nitro_arom", |
| "184": "fr_nitro_arom_nonortho", |
| "185": "fr_nitroso", |
| "186": "fr_oxazole", |
| "187": "fr_oxime", |
| "188": "fr_para_hydroxylation", |
| "189": "fr_phenol", |
| "190": "fr_phenol_noOrthoHbond", |
| "191": "fr_phos_acid", |
| "192": "fr_phos_ester", |
| "193": "fr_piperdine", |
| "194": "fr_piperzine", |
| "195": "fr_priamide", |
| "196": "fr_prisulfonamd", |
| "197": "fr_pyridine", |
| "198": "fr_quatN", |
| "199": "fr_sulfide", |
| "200": "fr_sulfonamd", |
| "201": "fr_sulfone", |
| "202": "fr_term_acetylene", |
| "203": "fr_tetrazole", |
| "204": "fr_thiazole", |
| "205": "fr_thiocyan", |
| "206": "fr_thiophene", |
| "207": "fr_unbrch_alkane", |
| "208": "fr_urea" |
| }, |
| "initializer_range": 0.02, |
| "intermediate_size": 3072, |
| "label2id": {}, |
| "layer_norm_eps": 1e-12, |
| "max_position_embeddings": 128, |
| "model_type": "bert", |
| "norm_mean": [ |
| 10.890723144618788, |
| 10.890723144618788, |
| 0.21343388121819523, |
| -0.47479919732815085, |
| 0.7575952467160214, |
| 15.058848034235334, |
| 322.0404336964272, |
| 302.34053896529144, |
| 321.72725229304234, |
| 120.57629338572364, |
| 0.0, |
| 0.24757252385685627, |
| -0.39471296728662697, |
| 0.3973168067389326, |
| 0.24496868440455072, |
| 1.190744454480243, |
| 1.9488217403445152, |
| 2.6407709860281643, |
| 23.25861372084106, |
| 10.060531315605326, |
| 2.2161700534001354, |
| -2.207418342850008, |
| 2.259451630521648, |
| -2.2880399722035074, |
| 6.3104271722093745, |
| 0.12367041391105228, |
| 2.8753204527527303, |
| 1.795552413679092, |
| 751.2897159793655, |
| 16.304112592070773, |
| 13.19453329229501, |
| 13.528281016655743, |
| 11.128169709503066, |
| 7.717101756882178, |
| 8.059525765429905, |
| 5.826120268037259, |
| 6.2146640281534955, |
| 4.0610472287253625, |
| 4.387371617498851, |
| 2.80646796389371, |
| 3.071153954957299, |
| -2.304538310412576, |
| 15.543177792899547, |
| 6.574640336231211, |
| 3.4314334055540914, |
| 136.41248000140197, |
| 10.30712330019729, |
| 7.440244550553802, |
| 3.014517876732346, |
| 3.609320976105593, |
| 2.5182151458026762, |
| 1.279706593583509, |
| 6.6556157038182455, |
| 5.9826568697256, |
| 2.912340573282882, |
| 2.46748496165417, |
| 18.39088015483851, |
| 34.33030533783961, |
| 25.01501069781167, |
| 12.230971232623284, |
| 9.24839647484535, |
| 16.136079294988217, |
| 0.39827804984072124, |
| 13.706151168172964, |
| 2.080031156994268, |
| 24.872538979073866, |
| 16.833746646221318, |
| 46.8207367246086, |
| 0.0, |
| 6.05843547982381, |
| 6.714673764379982, |
| 5.20121721531816, |
| 2.2246761133545356, |
| 3.9248457155258243, |
| 33.94097756935848, |
| 9.387963186742425, |
| 6.268057202278418, |
| 25.424695667222867, |
| 35.76402688335145, |
| 0.5832548680488311, |
| 6.720005788988242, |
| 0.0, |
| 62.92635887360836, |
| 3.5128407631899212, |
| 6.7047326741723605, |
| 0.014375949730434904, |
| 9.931107430769568, |
| 16.059305035568784, |
| 25.953894152576073, |
| 10.536103455552395, |
| 14.208287985773676, |
| 23.21161012944533, |
| 20.27963452452986, |
| 5.742501873260384, |
| 9.762590942319303, |
| 1.079701658739962, |
| 16.33169254570006, |
| 6.638459480399773, |
| 2.5666522182979303, |
| 0.6280508733509125, |
| 8.612717962595415, |
| 3.102042547254087, |
| 3.380920112045812, |
| 0.6422233219614017, |
| 0.3601360355181982, |
| 23.04551407989522, |
| 1.0723641126391616, |
| 5.243942370661427, |
| 0.21152586771447282, |
| 0.6208251473477406, |
| 0.8323510150622135, |
| 0.9803536345776032, |
| 1.2855271774721677, |
| 2.2658808120497707, |
| 4.504256712508186, |
| 0.9810085134250164, |
| 5.944007858546169, |
| 4.063195808775377, |
| 0.16928618205631957, |
| 0.4682383759004584, |
| 0.637524557956778, |
| 3.0982318271119844, |
| 2.768164685658153, |
| 88.65135618860518, |
| 0.011132940406024885, |
| 0.09004584151931892, |
| 0.06385068762278978, |
| 0.054027504911591355, |
| 0.019318925998690242, |
| 1.9652914210870989, |
| 0.12442698100851342, |
| 0.043222003929273084, |
| 0.030451866404715127, |
| 0.030451866404715127, |
| 0.7511460379829732, |
| 0.720694171578258, |
| 0.0003274394237066143, |
| 0.01669941060903733, |
| 0.006548788474132285, |
| 2.6614276358873608, |
| 0.7193844138834316, |
| 0.09233791748526522, |
| 0.010478061558611657, |
| 0.07400130975769482, |
| 0.2203667321545514, |
| 0.12442698100851342, |
| 0.0009823182711198428, |
| 0.0006548788474132286, |
| 0.0022920759659463, |
| 0.13686967910936476, |
| 0.026522593320235755, |
| 0.731827111984283, |
| 0.005893909626719057, |
| 0.6152586771447283, |
| 0.6633922724296005, |
| 0.0003274394237066143, |
| 0.0003274394237066143, |
| 0.0, |
| 0.9800261951538966, |
| 0.0, |
| 0.5792403405370007, |
| 0.0, |
| 0.0, |
| 0.0006548788474132286, |
| 0.014407334643091027, |
| 0.46594629993451214, |
| 0.032089063523248196, |
| 0.0026195153896529143, |
| 0.43876882776686316, |
| 0.0029469548133595285, |
| 0.0032743942370661427, |
| 0.12082514734774066, |
| 0.01899148657498363, |
| 0.0, |
| 0.0, |
| 0.024230517354289455, |
| 0.017026850032743943, |
| 0.0, |
| 0.003601833660772757, |
| 0.1741977734119188, |
| 0.032089063523248196, |
| 0.07236411263916176, |
| 0.0016371971185330713, |
| 0.0009823182711198428, |
| 0.0006548788474132286, |
| 0.0, |
| 0.023248199083169614, |
| 0.0016371971185330713, |
| 0.24885396201702684, |
| 0.029142108709888672, |
| 0.02848722986247544, |
| 0.0, |
| 0.0, |
| 0.1922069417157826, |
| 0.060576293385723644, |
| 0.022593320235756387, |
| 0.0, |
| 0.3192534381139489, |
| 0.0, |
| 0.0481335952848723, |
| 0.04780615586116568, |
| 0.010150622134905042, |
| 0.005239030779305829, |
| 0.0114603798297315, |
| 0.06516044531761624, |
| 0.0, |
| 0.06123117223313687, |
| 0.020956123117223315, |
| 0.051735428945645055 |
| ], |
| "norm_std": [ |
| 2.9742810130957453, |
| 2.9742810130957453, |
| 0.22091421647451978, |
| 1.2506371733525792, |
| 0.14772224910150933, |
| 4.841413189345, |
| 74.62710393181392, |
| 70.70539015877009, |
| 74.53826593990861, |
| 28.077319358477485, |
| 0.0, |
| 0.07319954123176795, |
| 0.06973422734835738, |
| 0.06936557065765014, |
| 0.06804140478194969, |
| 0.16749709860176282, |
| 0.20963491133900067, |
| 0.25126808946650775, |
| 11.532042109130197, |
| 0.25700273557042896, |
| 0.11886246110521807, |
| 0.12819462491363143, |
| 0.09561727624037732, |
| 0.16734148678138325, |
| 0.899472224323172, |
| 0.2864585096836444, |
| 0.3123563991349603, |
| 0.34810229261316095, |
| 262.17961222053566, |
| 3.7494558733254495, |
| 3.072388069230129, |
| 3.09135242915996, |
| 2.5837977726271864, |
| 1.9220085424972257, |
| 1.9883976820280092, |
| 1.6386086524052401, |
| 1.7552260324908746, |
| 1.2968258652185012, |
| 1.4020077882406925, |
| 1.0234327559419454, |
| 1.1182459866689427, |
| 0.7524122958455998, |
| 3.830145654016041, |
| 1.7904236005089613, |
| 1.1582919732784391, |
| 30.862839853263818, |
| 6.011848002162421, |
| 7.01381052281094, |
| 4.762867500907045, |
| 4.405564242065125, |
| 3.5973566014242784, |
| 2.764944166468538, |
| 4.776515511835174, |
| 5.266377340190319, |
| 4.559038379903133, |
| 4.9546938246235745, |
| 15.014651112046339, |
| 15.393824697049617, |
| 13.186217776968228, |
| 8.87001455234176, |
| 6.794456065083698, |
| 10.629979265061358, |
| 1.4745781475278366, |
| 6.873964054423021, |
| 3.997759363652105, |
| 16.843727076551982, |
| 13.103788166805446, |
| 19.96915407141435, |
| 0.0, |
| 7.320991481785845, |
| 5.039961213902584, |
| 6.057693477626314, |
| 4.228707520312698, |
| 6.954635511805201, |
| 16.019104209937954, |
| 7.0231212464664665, |
| 6.9014246700360955, |
| 15.603028173090843, |
| 18.129187151681922, |
| 1.8642167751084433, |
| 7.6743957660923074, |
| 0.0, |
| 21.315085099981975, |
| 7.205745259640768, |
| 5.765767118375036, |
| 0.2748326678084193, |
| 8.730941497683844, |
| 11.833390269783235, |
| 16.60015924940626, |
| 11.215325483289574, |
| 12.31187100542118, |
| 17.050898197131517, |
| 14.285933801889867, |
| 6.315347943356142, |
| 12.520835754918128, |
| 2.3740163254026316, |
| 9.402364236261059, |
| 6.033654683278065, |
| 2.2920329677514872, |
| 1.150633118211775, |
| 5.449629321224992, |
| 2.9819591098741065, |
| 2.7668310887702323, |
| 1.6489794416426926, |
| 0.1899383724773681, |
| 5.350292500768258, |
| 0.9239248040746499, |
| 1.5992859136136681, |
| 0.5217453108899565, |
| 0.6777682860563191, |
| 0.8229206137370568, |
| 0.7558592819549429, |
| 0.8672571727473917, |
| 0.9273026668558195, |
| 1.5726714747100161, |
| 0.8061848540620313, |
| 1.8652568593132832, |
| 1.863094440320059, |
| 0.46328142675787515, |
| 0.6019013539086466, |
| 0.7376442808172, |
| 0.9938465639889058, |
| 1.1318690418768789, |
| 20.42246514576899, |
| 0.10799943005106018, |
| 0.36019958884701586, |
| 0.3084432444927248, |
| 0.2303761493012199, |
| 0.13764339830499456, |
| 1.4886957687489693, |
| 0.34272194622169816, |
| 0.24961968156144382, |
| 0.17372227572939403, |
| 0.17372227572939403, |
| 0.7249124303790686, |
| 0.7198996074310567, |
| 0.018092324536399498, |
| 0.1306729472452519, |
| 0.08065917085895212, |
| 1.4491959895786033, |
| 0.6844020527746904, |
| 0.29841356748488884, |
| 0.12228010351843446, |
| 0.2679543060839002, |
| 0.44053503416428735, |
| 0.34272194622169816, |
| 0.031326559369552594, |
| 0.02558222001915338, |
| 0.0542374520154264, |
| 0.6414998781691198, |
| 0.266469108594816, |
| 0.7894537343394138, |
| 0.07654522490679108, |
| 0.7785031196366018, |
| 0.8594722905507239, |
| 0.01809232453639986, |
| 0.018092324536399546, |
| 0.0, |
| 0.7556340658599214, |
| 0.0, |
| 0.8449402232550353, |
| 0.0, |
| 0.0, |
| 0.0361846490727996, |
| 0.1245372275522455, |
| 0.7612845482836946, |
| 0.17623664637484152, |
| 0.05111412259617124, |
| 0.8587257298502835, |
| 0.054205813993403185, |
| 0.057128561853474875, |
| 0.33484375571728386, |
| 0.14121107501709373, |
| 0.0, |
| 0.0, |
| 0.16605021068192455, |
| 0.12937131216273168, |
| 0.0, |
| 0.059907098536425125, |
| 0.47920980599460433, |
| 0.17991418293252262, |
| 0.2750290400257409, |
| 0.04042915660916188, |
| 0.031326559369552025, |
| 0.025582220019154608, |
| 0.0, |
| 0.15497573364041822, |
| 0.040429156609162666, |
| 0.5770300257166963, |
| 0.2159385420377715, |
| 0.2145048142229161, |
| 0.0, |
| 0.0, |
| 0.4038836211596286, |
| 0.23855147466610419, |
| 0.14860303535419442, |
| 0.0, |
| 0.5280996989425646, |
| 0.0, |
| 0.23167930088547434, |
| 0.2164035235798335, |
| 0.10023765263203091, |
| 0.07219129681478019, |
| 0.10643796091568967, |
| 0.25335539449691746, |
| 0.0, |
| 0.2438166366807864, |
| 0.2638804228758098, |
| 0.2244295703161308 |
| ], |
| "num_attention_heads": 12, |
| "num_hidden_layers": 12, |
| "pad_token_id": 0, |
| "position_embedding_type": "absolute", |
| "property_subset": "all", |
| "torch_dtype": "float32", |
| "train_size": 0.3, |
| "train_type": "mlm", |
| "transformers_version": "4.34.1", |
| "type_vocab_size": 2, |
| "use_cache": true, |
| "vocab_size": 4096 |
| } |
|
|